Mergebambyfactor
Web- Added a new argument to mergeBamByFactor function: version 2.1.15 - varseq functions argument deprecated - Added SE Replacement method (SYSargsList) - writeTargetsout … WebmergeBamByFactor.Rd Merges BAM files based on sample groupings provided by a factor using internally the mergeBam function from the Rsamtools package. The function also …
Mergebambyfactor
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WebPackage ‘systemPipeR’ January 25, 2024 Type Package Title systemPipeR: NGS workflow and report generation environment Version 2.0.5 Date 2024-12-15 Web4 jun. 2024 · mergeBamByFactor: Merge BAM files based on factor; moduleload: Interface to allow full use of the Environment Modules system... olBarplot: Bar plot for intersect …
Web# # pre code {# # white-space: pre !important; # # overflow-x: scroll !important; # # word-break: keep-all !important; # # word-wrap: initial !important ... WebProject Website:. Contribute to tgirke/systemPipeR development by creating an account on GitHub.
Web7 aug. 2024 · Package ‘systemPipeR’ October 9, 2015 Type Package Title systemPipeR: NGS workflow and report generation environment Version 1.2.23 Date 2015-20-08 Author Thomas Girke… Web## ----style, echo = FALSE, results = 'asis'----- BiocStyle::markdown() options(width = 60, max.print = 1000) knitr::opts_chunk$set( eval = as.logical(Sys.getenv ...
Weblzhan140 authored on 23/05/2024 23:25:09 Showing1 changed files man/mergeBamByFactor.Rd. History View file @4fc356ee2
Web- added writeTargetsRef and mergeBamByFactor: version 1.3.17 - 1.3.10 - Converted main vignette to R Markdown - Instructions to download sample data via systemPipeRdata - Fix for missing systemPipeRdata on build system - Fix to get correct name of HTML page on Bioc page: version 1.3.16 - Fixed minor bug in runCommandline: version 1.3.14 - 1.3.15 インスタ 場所 英語 おしゃれWeb## ----style, echo = FALSE, results = 'asis'----- BiocStyle::markdown() options(width=60, max.print=1000) knitr::opts_chunk$set( eval=as.logical(Sys.getenv("KNITR ... インスタ 場所 絵文字WebmergeBamByFactor <-function (args, mergefactor = " Factor ", overwrite = FALSE, silent = FALSE, ...) {if (all(class(args) != " SYSargs " & class(args) != " SYSargs2 ")) stop(" … padiglioni fortezza da bassoWebpre code { white-space: pre !important; overflow-x: scroll !important; word-break: keep-all !important; word-wrap: initial !important; } document.addEventListener ... padiglioni ospedale maggiore parmaWebGenerates targets file with sample-wise reference as required for some NGS applications, such as ChIP-Seq containing input samples. The reference sample information needs to be provided in the input file in a column called SampleReference where the values reference the labels used in the SampleName column. Sample rows without reference … padiglioni sant\u0027orsolaWebAll rows of merged parent samples are removed. The functionality provided by mergeBamByFactor is useful for experiments where pooling of replicates is … padiglioni trasportiWeb11 aug. 2016 · The mergeBamByFactor function merges BAM files based on grouping information specified by a factor, here the Factor column of the imported targets file. It … padiglioni ospedale policlinico di messina